@diaruys right after I posted that message, I kid you not, it made me log in again, and didn't work after. I could log in, but nothing was there. Im not entirely sure, but I think it had to do with sync from my Android. Or failing that, it's simply Opera on Linux that's being crazy.
It's working now, although I have double all of my sync'd items now, which was annoying. Im only guessing, but I am pretty sure it had to do with the fact that my passphrase wasn't being asked for on my desktop. There was no need on my phone as everything was still on there. I took the advice of a few people I seen post and reset my passphrase, to no avail. Eventually, when I went to log into opera's sync page, the one where you view your sync'd content, I chose sign in as someone else even though the option for my account was just one click away. Re logged in with my normal creds, and suddenly everything was working...uh...well, it was once I did the same thing on my phone. Hope this helps.